Philr on Statistics @ Home
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Recent content in Philr on Statistics @ HomeHugo -- gohugo.ioen-ENstats.at.home@gmail.com (Justin and Rachel Silverman)stats.at.home@gmail.com (Justin and Rachel Silverman)(c) 2017 Justin and Rachel SilvermanWed, 20 Sep 2017 00:00:00 +0000Plotting a Sequential Binary Partition on a Tree in R
http://statsathome.com/2017/09/20/plotting-a-sequential-binary-partition-on-a-tree-in-r/
Wed, 20 Sep 2017 00:00:00 +0000stats.at.home@gmail.com (Justin and Rachel Silverman)http://statsathome.com/2017/09/20/plotting-a-sequential-binary-partition-on-a-tree-in-r/For users of PhILR (Paper, R Package), and also for users of the ILR transform that wan to make use of the awesome plotting functions in R. I wanted to share a function for plotting a sequential binary partition on a tree using the ggtree package. I recently wrote this for a manuscript but figured it might be of more general use to others as well.
In its simplest form a sequential binary partition can be represented as a binary tree.